Kidney diseases
Small panel (#148)
ADAMTS13, C3, CD46, CFB, CFH, CFHR5, CFI, DGKE, MMACHC, THBD
(10 genes, 24,2 kb)
Large panel (#191)
ADAMTS13, C3, CD46, CFB, CFH, CFHR1, CFHR2, CFHR3, CFHR4, CFHR5, CFI, DGKE, SAMD9, SAMD9L, MMACHC, THBD
(16 genes, 36,5 kb)
MLPA: CD46, CFI
Small panel (#33)
COL4A3, COL4A4, COL4A5
(3 genes, 15,1 kb)
Large panel (#34)
COL4A3, COL4A4, COL4A5, MYH9, COL4A1
(5 genes, 26 kb)
Small panel (#28)
ARL6, BBS1, BBS10, BBS12, BBS2, BBS4, BBS5, BBS7, BBS9, LZTFL1, MKKS, MKS1, SDCCAG8, TTC8
(14 genes, 24,2 kb)
Large panel (#71)
ARL6, BBIP1, BBS1, BBS10, BBS12, BBS2, BBS4, BBS5, BBS7, BBS9, CCDC28B, CEP290, IFT27, IFT74, LZTFL1, MKKS, MKS1, SDCCAG8, TMEM67, TRIM32, TTC8, WDPCP
(22 genes, 42 kb)
Small panel (#42)
BSND, CLCNKA, CLCNKB, KCNJ1, MAGED2, SLC12A1, SLC12A3
(7 genes, 14,5 kb)
MLPA:
SLC12A3
Small panel (#35)
BMP4, CHD1L, DSTYK, EYA1, GATA3, HNF1B, MUC1, PAX2, RET, ROBO2, SALL1, UMOD
(12 genes, 24,4 kb)
Large panel (#117)
BICC1, BMP4, BMP7, CDC5L, CHD1L, CHRM3, CRKL, DSTYK, EYA1, FGF20, FRAS1, FREM1, FREM2, GATA3, GLIS3, GREM1, GRIP1, HNF1B, HPSE2, ITGA8, JAG1, KAL1/ANOS1, KAT6B, LIFR, LRIG2, LRP4, MUC1, NOTCH2, NRIP1, PAX2, PBX1, RAD51C, RET, ROBO2, SALL1, SALL4, SIX1, SIX2, SIX5, SOX17, STRA6,TBC1D1,TBC1D24, TBX18, TNXB, TRAP1, UMOD, UPK3A, WNT4, WT1
(50 genes, 146,7 kb)
Small panel (Sanger sequencing)
AGXT, HOGA1, GRHPR
(3 genes, 3,2 kb)
Small panel (#43)
CUL3, CYP17A1, HSD11B2, KCNJ5, KLHL3, NR3C2, PDE3A, SCNN1A, SCNN1B, SCNN1G, WNK4
(11 genes, 24,1 kb)
Long-range PCR: CYP11B1-CYP11B2 fusion gene (fam. hyperaldosteronism type I)
Large panel (#190):
CACNA1D, CACNA1H, CLCN2, CUL3, CYP11B1, CYP11B2, CYP17A1, HSD11B2, KCNJ5, KLHL3, NR3C1, NR3C2, PDE3A, PPARG, RMND1, SCNN1A, SCNN1B, SCNN1G, SDHA, SDHAF2*, SDHB*, SDHC*, SDHD*, TMEM127, WNK1, WNK4
(26 genes, 60,7 kb)
Long-range PCR: CYP11B1-CYP11B2 fusion gene (fam. hyperaldosteronism type I)
MLPA:
SDHAF2, SDHB, SDHC, SDHD
Small panel (#40)
DYNC2H1, EVC, EVC2, IFT80, WDR34
(5 genes, 23,8 kb)
Large panel (#69)
CEP120, DYNC2H1, DYNC2LI1, EVC, EVC2, IFT122, IFT140, IFT172, IFT43, IFT52, IFT80, KIAA0586, NEK1, TTC21B, WDR19, WDR34, WDR35, WDR60
(18 genes, 66,7 kb)
Small panel (#024)
AHI1, CC2D2A, CEP290, RPGRIP1L, TMEM138, TMEM216, TMEM237, TMEM67
(8 genes, 24,9 kb)
MLPA:
NPHP1
Large panel (#025)
AHI1, ARL13B, ATXN10, B9D1, B9D2, C5ORF42, CC2D2A, CEP104, CEP290, CEP41, CSPP1, INPP5E, KIAA0556/KATNIP, KIAA0586, KIF7, MKS1, NPHP1*, NPHP3, OFD1, PDE6D, POC1B, RPGRIP1L, TCTN1, TCTN2, TCTN3, TMEM138, TMEM216, TMEM231, TMEM237, TMEM67, ZNF423
(31 genes, 85,2 kb)
MLPA:
NPHP1
Small panel (#26)
CC2D2A, CEP290, MKS1, RPGRIP1L, TMEM216, TMEM231, TMEM67
(7 genes, 23,1 kb)
Large panel (#27)
B9D1, B9D2, CC2D2A, CEP290, KIF14, MKS1, NPHP3, RPGRIP1L, TCTN2, TMEM216, TMEM231, TMEM67
(12 genes, 34,6 kb)
Small panel (#53)
AGXT, APRT, CASR, CLCN5, CYP24A1, GRHPR, HOGA1, SLC2A9, SLC34A1, SLC36A2, SLC3A1, SLC7A9, SLC9A3R1, XDH
(14 genes, 24,3 kb)
Large panel (#248)
AGXT, APRT, CASR, CLCN5, CLDN14, CLDN16, CLDN19, CYP24A1, FAM20A, GCM2, GDNF, GRHPR, GTF2L, GUCY2C, HOGA1, HPRT1, INSR, MOCOS, OCRL, PRPS1, PTH1R, SBDS, SLC2A9, SLC26A1, SLC34A1, SLC34A3, SLC36A2, SLC3A1, SLC6A19, SLC6A20, SLC7A9, SLC9A3R1, XDH
(33 genes, 57,8 kb)
MLPA:
AGXT, GRHPR, SLC3A1, SLC7A9
Small panel (#31)
CEP290, IQCB1, NPHP1, NPHP3, NPHP4, TMEM67
(6 genes, 22,7 kb)
MLPA:
NPHP1
Large panel (#189)
ADAMTS9, ANKS6, CEP164, CEP290, CEP83/CCDC41, DCDC2, FAN1, GLIS2, INVS/NPHP2, IQCB1, MAPKBP1, NEK8, NPHP1, NPHP3, NPHP4, SLC41A1, TMEM67, TTC21B, WDR19, XPNPEP3, ZNF423
(21 genes, 68,3 kb)
MPLA:
NPHP1
Congenital/infantile/childhood:
Small panel (#37)
CD2AP, COQ6, LAMB2, NPHS1, NPHS2, PLCE1, TRPC6, WT1
(8 Gene, 24,8 kb)
Juvenile/Adult:
Small panel (#38)
ACTN4, COL4A3, COL4A4, COL4A5, INF2, NPHS2, TRPC6
(7 genes, 25,0 kb)
Nephrotic syndrome/focal segmental glomerulosclerosis, complete:
Large panel (#118)
ACTN4, ADCK4, ARHGAP24, ALMS1, ANLN, APOA1, APOL1, ARHGDIA, CD2AP, CD151, CLCN5, COL4A3, COL4A4, COL4A5, COQ2, COQ6, CRB2, CUBN, DGKE, EMP2, FAT1, FGA, FN1, G6PC, GLA, INF2, ITGA3, KANK1, KANK2, KANK4, LAMB2, LMX1B, LRP2, LYZ, MEFV, MMACHC, MYH9, MYO1E, NPHS1, NPHS2, NUP107, NUP205, NUP93, NXF5, PAX2, PDSS2, PLCE1, PMM2, PTPRO, SALL1, SCARB2, SEC61A1, SGPL1, SMARCAL1, TRPC6, WDR73, WT1, XPO5
(58 genes, 190,7 kb)
Small panel (#106): Syndromic SRNS (steroid-resistant nephrotic syndrome)
ADCK4, ARHGDIA, GATA3, INF2, LMX1B, MAFB, MYH9, PAX2, PMM2, SCARB2, SMARCAL1, WDR73, WT1
(13 genes, 24,4 kb)
MLPA:
COL4A3, COL4A4, COL4A5, LMX1B, WT1
Small panel (#45)
CDKN1B, DIS3L2, FH, FLCN, HRAS, MET, TSC1, TSC2, VHL, WT1
(10 genes, 22,4 kb)
Large panel (#121)
BUB1B, CDKN1B, DICER1, DIS3L2, FH, FLCN, HNF1A, HRAS, MAX, MET, NF1, NF2, PIK3CA, TRIP13, TSC1, TSC2, VHL, WT1
(18 genes, 48,8 kb)
MLPA:
FLCN, TSC1, TSC2, VHL, WT1, HNF1A
Small panel (#75)
ATP7B, CASR, CDC73, CLCN5, COX10, FGF23, HNF4A, HRAS, OCRL, PHEX, SLC2A2, SLC34A1, SLC9A3R1
(13 genes, 24,5 kb)
Large panel (#76)
APOPT1, ATP7B, CASR, CDC73, CLCN5, COA5, COX10, COX6B1, DMP1, EHHADH, , ENPP1, FASTKD2, FGF23, HNF4A, HRAS, MEN1, OCRL, PHEX, PTH1R, SLC2A2, SLC34A1, SLC9A3R1, TACO1
(23 genes, 39,3 kb)
Dominant inheritance:
Small panel (#192)
1. PKD1, 2. DNAJB11, EYA1, HNF1B, OFD1, PAX2, PKD2
(7 genes, 24,6 kb)
MLPA:
PKD1, PKD2
Recessive inheritance:
Small panel (#247)
1. PKHD1, 2. DZIP1L, OFD1
(3 genes, 17,5 kb)
Tubulointerstitial nephropathy
Small panel (#51)
FAN1, HNF1B, MUC1, PAX2, REN, UMOD
(6 genes, 6,9 kb)
Polycystic kidney disease, complete
Large panel (#193)
BMP4, CHD1L, DNAJB11, DZIP1L, EYA1, FAN1, FRAS1, GANAB, HNF1B, LRP5, MUC1, OFD1, PAX2, PKD1, PKD2, PKHD1, PRKCSH, RAD51C, REN, RET, SEC63, TMEM260, TSC1, TSC2, UMOD
(25 genes, 89,2 kb)
MLPA:
HNF1B, PKD1, PKD2, TSC1, TSC2
Small panel (#209)
APOA1, APOA2, APOC2, APOC3, APP, B2M, CST3, FGA, GSN, LYZ, MEFV, MVK, NLRP3, TTR
(14 genes, 16,6 kb)
Small panel (#188)
ATP6V0A4, ATP6V1B1, CA2, FOXI1, SLC4A1, SLC4A4, VPS33B
(7 genes, 13,6 kb)
Standard panel (Sanger sequencing)
ACE, AGT, AGTR1, REN
(4 genes, 7,8 kb)
Large panel (#67)
All genes in the panel (411 genes, 1014,8 kb)
ACE (3,9 kb), ACTN4 (2,7 kb), ADAMTS13 (4,3 kb), ADCK4 (1,6 kb), AGT (1,5 kb), AGTR1 (1,2 kb), AGXT (1,2 kb), ALAD (0,99 kb), AP2S1 (0,43 kb), AQP2 (0,8 kb), ARHGDIA (0,6 kb), BBS10 (2,2 kb), BSND (0,96 kb), C3 (5 kb), CASR (3,2 kb), CD46 (1,2 kb), CFB (2,3 kb), CFH (3,7 kb), CFI (1,8 kb), CLCN2 (2,7 kb), CLCN5 (2,2 kb), CLCNKA (2,1 kb), CLCNKB (2,1 kb), CLDN16 (0,92 kb), CLDN19 (0,68 kb), COL4A3 (5 kb), COL4A4 (5,1 kb), COL4A5 (5,1 kb), COQ2 (1,3 kb), COQ6 (1,4 kb), COQ8B/ADCK4 (1,64 kb), CRB2 (3,9 kb), CYP24A1 (1,5 kb), DGKE (1,7 kb), DIS3L2 (2,7 kb), DNAJB11 (1,1 kb), DZIP1L (2,3 kb), FAN1 (3,1 kb), FLCN (1,7 kb), GANAB (2,9 kb), GNA11 (1,1 kb), GRHPR (1 kb), HNF1A (1,9 kb), HNF1B (1,7 kb), HNF4A (1,36 kb), HOGA1 (1 kb), HPRT1 (0,66 kb), HSD11B2 (1,22 kb), INF2 (3,8 kb), INVS/NPHPL (3,2 kb), KCNJ1 (1,18 kb), KCNJ10 (1,1 kb), KCNJ5 (1,3 kb), LAMB2 (5,4 kb), LMX1B (1,2 kb), LRP5 (4,8 kb), MAGED2 (1,8 kb), MAX (0,5 kb), MMACHC (0,8 kb), MUC1 (nach Rücksprache), MYH9 (5,9 kb), MYO1E (3,3 kb), NPHP1 (2,2 kb), NPHP2 (3,2 kb), NPHP3 (4 kb), NPHS1 (3,7 kb), NPHS2 (1,2 kb), NR3C2 (3 kb), PAX2 (1,3 kb), PDSS2 (1,2 kb), PKD1 (12,9 kb), PKD2 (2,9 kb), PKHD1 (12,2 kb), PLCE1 (6,9 kb), PTPRO (3,7 kb), REN (1,2 kb), RET(3,3 kb), SCNN1B (1,9 kb), SCNN1G (2 kb), SLC12A3 (3,1 kb), SLC34A1 (1,9 kb), SLC3A1 (2,1 kb), SLC7A9 (1,5 kb), SMARCAL1 (2,9 kb), THBD (1,7 kb), TRPC6 (2,8 kb), TSC1 (3,5 kb), TSC2 (5,4 kb), UMOD (1,9 kb), VHL (0,6 kb), WDR73 (1,1 kb), WNK1 (7,15 kb), WNK4 (3,73 kb), WT1 (1,6 kb)
Contact
Assistant Prof. Dr. Bodo Beck
Telephone +49 221 478-86824
Email bodo.beck@uk-koeln.de
Dr. Florian Erger
Telephone +49 221 478-86828
Email florian.erger@uk-koeln.de